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+1 for this option, it would be great.
I see from a 2015 post (message2363) you said you would be adding it soon, so I guess its still coming :)

In the file transfer window, there is a hotlist button on both the local & remote sides of the window. This means I could have an entry to some dir on my local PC, but if I select that entry on the remote side, of course it doesn't find that path on the remote PC. So there should be different hotlists for the local computer and the remotes.

Ideally, the remote side, it would in fact have different hotlists for each remote. For example, I have an entry C:\Users\Fred\MyDocs & C:\Users\Jane\MyDocs.  As you can see, it depends on which remote I am viewing as to whether either of those entries goes anywhere.